SKIP: Approach-Avoid (ds005265)
SoCal Kinesia and Incentivization for Parkinson's Disease (SKIP): Approach-Avoid
Task fMRI and T1w brain MRI of healthy young adults moving a joystick toward or away from positive and negative pictures, one of the task releases of the SKIP Parkinson's disease project. 78 participants, Siemens Prisma 3T, BIDS, CC0.
Overview
This OpenNeuro dataset is one of the task fMRI releases of SKIP (SoCal Kinesia and Incentivization for Parkinson's Disease), a project at the University of California, Santa Barbara that studies movement and how incentives modulate it. In this approach-avoid task, participants saw pictures with positive or negative valence and had to pull a joystick toward themselves (approach) or push it away (avoid) within a time limit. Crossing picture valence with movement direction gives congruent trials (positive-approach, negative-avoid) and incongruent ones. Snapshot 1.0.0 appeared on 20 June 2024 under a CC0 waiver. Sibling releases from the same project are SKIP: Incentivized Reaching and SKIP Active Escape.
Composition
The release holds 78 right-handed healthy young adults, 58 women and 20 men by participants.tsv, aged 18 to 26 (one age is missing). Every participant has one T1-weighted image and the approach-avoid task in eight runs, except one participant with seven runs. Although the project targets Parkinson's disease, this version has healthy controls only; the README says patient data and further measures such as cardiac-autonomic and pupillometry recordings will follow.
Acquisition
All images come from a Siemens Prisma fit 3T scanner with a 64-channel head and neck coil at the UCSB Brain Imaging Center. The structural image is an MPRAGE with 0.94 mm slices. Task runs use echo-planar imaging with 2.5 mm slices, a TR of 1.9 s, a TE of 30 ms and multiband factor 2. Images are stored as compressed NIfTI in BIDS without field maps.
Annotations
There are no image annotations. Each run has an events file with trial timing and conditions.
Known limitations
- Healthy controls only, in a narrow young age band, with about three women for every man.
- No field maps are included, so distortion correction has to rely on other methods.
- The README header names version 1.0.1, but OpenNeuro lists only snapshot 1.0.0.
- The cited paper is a bioRxiv preprint that the dataset names for citation; it was not checked for task-specific numbers.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 78 subjects.
Sex
- Female 58 74%
- Male 20 26%
participants.tsv (Gender) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Contrast / sequence
Groups can overlap
- T1-weighted 78 100%
- BOLD fMRI 78 100%
anat/*_T1w.nii.gz, func/*_bold.nii.gz in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Scanner vendor
- Siemens Healthineers 78 100%
anat/*_T1w.json (Manufacturer) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Country
- United States 78 100%
anat/*_T1w.json (InstitutionName) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Age
mean 20.6, median 20, range 18 to 26
participants.tsv (Age) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Condition
Groups can overlap
- Healthy control 78 100%
participants.tsv (Group) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Field strength
- 3 T 78 100%
anat/*_T1w.json (MagneticFieldStrength) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Age by sex
Reported cross table. Missing cells were not published (fewer than 10 or not reported).
- 3920-2916
- 1810-19n/a
participants.tsv (Gender; Age) in File listing, participants.tsv and JSON sidecars of the ds005265 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | bold | Subjects with exactly this set |
|---|---|---|
78 |
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
dataset_description.json of snapshot 1.0.0 states "License" CC0.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Dundon NM, Rizor E, Stasiak J, Wang J, Sabugo K, Villaneuva C, Barandon P, Bostan AC, Lapate RC, Grafton ST. Dissociation of novel open loop from ventral putamen to motor areas from classic closed loop in humans II: task-based function. bioRxiv (2024). doi:10.1101/2024.06.18.599622
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.