SKIP Active Escape (ds005266)
SoCal Kinesia and Incentivization for Parkinson's Disease (SKIP): Active Escape
Task fMRI and T1w MRI of healthy young adults making timed motor responses to avoid electric shocks of varying intensity and controllability, one of the task releases of the SKIP Parkinson's disease project.
Overview
This release is one of the task-based fMRI datasets of SoCal Kinesia and Incentivization for Parkinson's Disease (SKIP), a project at UC Santa Barbara funded by Aligning Science Across Parkinson's through the Michael J. Fox Foundation. SKIP studies how incentives shape movement, with the aim of comparing people with Parkinson's disease and healthy controls. In the active escape task, participants watched an 18-second countdown and had to respond quickly with a movement to avoid an electric shock. Shock intensity (mild or unpleasant) and whether a fast response could prevent the shock (controllable or uncontrollable) were varied, giving four trial conditions. The images are on OpenNeuro as ds005266 under CC0. Sibling SKIP releases cover incentivized reaching, an approach-avoid task and a 7T resting-state study.
Composition
The release holds 68 healthy, right-handed young adults: 52 female, 15 male and one nonbinary, aged 18 to 30 with a median of 20. The README speaks of 69 participants, one more than the files contain. No Parkinson's disease patients are included yet; the README says they and further measures such as cardiac-autonomic and pupillometry data are planned for later versions.
Acquisition
All scans come from one Siemens Prisma fit 3T scanner with a 64-channel head and neck coil at the UCSB Brain Imaging Center. Each subject has a 0.94 mm T1w MPRAGE and up to seven runs of multiband echo-planar BOLD imaging with 2.5 mm voxels and a repetition time of 1.9 s. 66 subjects have all seven runs, one has four and one has two.
Annotations
There are no image labels. Event files describe the trial timing and conditions of each run, and participants.tsv gives age, handedness, gender and group.
Known limitations
- Healthy controls only, despite the Parkinson's disease focus of the project.
- Narrow age range of mostly university-age adults, with a strong female majority.
- Single site and scanner.
- Two subjects have fewer task runs, and a few runs lack an events file.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 68 subjects.
Sex
- Female 52 76%
- Male 15 22%
- Other 1 1%
participants.tsv (Gender) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Contrast / sequence
Groups can overlap
- T1-weighted 68 100%
- BOLD fMRI 68 100%
anat/*_T1w.nii.gz, func/*_bold.nii.gz in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Scanner vendor
- Siemens Healthineers 68 100%
anat/*_T1w.json (Manufacturer) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Country
- United States 68 100%
anat/*_T1w.json (InstitutionName) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Age
mean 20.5, median 20, range 18 to 30
participants.tsv (Age) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Condition
Groups can overlap
- Healthy control 68 100%
participants.tsv (Group) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Field strength
- 3 T 68 100%
anat/*_T1w.json (MagneticFieldStrength) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Age by sex
Reported cross table. Missing cells were not published (fewer than 10 or not reported).
- 3220-2911
- 2010-19n/a
participants.tsv (Gender; Age) in File listing, participants.tsv and JSON sidecars of the ds005266 BIDS repository (CC0), subjects counted per T1w and bold NIfTI file
Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | bold | Subjects with exactly this set |
|---|---|---|
68 |
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
dataset_description.json of snapshot 1.0.0 states "License" CC0.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Dundon NM, Rizor E, Stasiak J, Wang J, Sabugo K, Villaneuva C, Barandon P, Bostan AC, Lapate RC, Grafton ST. Dissociation of novel open loop from ventral putamen to motor areas from classic closed loop in humans II: task-based function. bioRxiv (2024). doi:10.1101/2024.06.18.599622
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.