NIMH-IRP Data Science and Sharing Team collection
NIMH-IRP Data Science and Sharing Team (NIMH Data Archive collection 2936)
Structural brain MRI of psychiatrically healthy children and adults from nuclear families, plus densely sampled single-subject task fMRI, released by NIH intramural teams for normative modelling and image quality work. 447 shared subjects, 440 in the family sample.
Overview
NIMH Data Archive collection 2936 is the release channel of the Data Science and Sharing Team of the NIMH Intramural Research Program. It bundles several MRI datasets collected in NIH intramural studies and shared as NDA Studies under one collection DOI. The bulk of it is the NIMH NHGRI data-sharing project, a structural MRI sample of healthy members of nuclear families from the National Human Genome Research Institute. It is useful for normative modelling and for image quality work; secondary analyses that built lifespan brain charts and a harmonization method draw on it.
Composition
The collection lists 447 shared subjects, all with records in the shared image data structure. 440 of them belong to the NIMH NHGRI release, whose description speaks of 441 people from 321 nuclear families, each with one T1-weighted scan. Two further releases from Peter Bandettini's group each contribute three subjects: a 3T task fMRI experiment with 100 runs per person, and a follow-up at 7T with 100 usable runs per person. A resting-state experiment is also registered. In the quality assessment paper that used the NHGRI scans, that cohort had 442 participants aged 5 to 78 years (mean 22.4), 252 male and 190 female, mostly children and adolescents.
Acquisition
The NHGRI T1-weighted images are MPRAGE scans with ASSET acceleration, 1.07 x 1.07 x 1.2 mm voxels and 124 slices, acquired on a 3T GE Signa scanner with an eight-channel head coil while participants watched a film. The task fMRI experiments used a GE 3T scanner and a Siemens 7T scanner with a 32-channel receive coil, with a visual stimulation and letter or number discrimination task and variants of it.
Annotations
Two raters scored every NHGRI T1 image for quality on a four-point scale, from good to unprocessable. Participants were free of psychiatric diagnoses according to clinician-administered structured interviews (SCID and the Conners adult ADHD interview for adults, the parent DICA for children).
Known limitations
This is a grouping of unrelated releases, not one designed study, and the collection page gives no per-release breakdown beyond the NDA Study cohorts. Family structure means many subjects are related. Demographics are published only for the paper's 442-person cohort, not the shared 440. The NDA page carries a notice that the repository is under review for possible changes.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 447 subjects.
Modality
- MRI 447 100%
Shared Data tab in NIMH Data Archive collection 2936 page (NIMH-IRP Data Science and Sharing Team), General, Experiments, Shared Data, Data Expected and Associated Studies tabs
Condition
Groups can overlap
- Healthy control 440 98%Age mean 22.4 ± 14.7, range 5.3 to 77.6
Cohorts in NDA Study 547, NIMH NHGRI data-sharing project (doi:10.15154/1463004); Table 1 in White et al. 2018, Automated quality assessment of structural magnetic resonance images in children, Hum Brain Mapp (PMC6866370)
Contrast / sequence
Groups can overlap
- T1-weighted 440 98%
Abstract in NDA Study 547, NIMH NHGRI data-sharing project (doi:10.15154/1463004)
Sex by condition
Reported cross table. A dot marks a cell the source does not give.
| Healthy control | |
|---|---|
| Female | 190 |
| Male | 252 |
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
A research proposal is reviewed and approved
NIMH Data Archive Data Use Terms and Conditions (Data Use Certification)
Terms every NIMH Data Archive data access request accepts. Data are for research, scholarship or teaching; they may only be shared with collaborators who hold their own access; re-identification is forbidden; each publication needs an NDA Study linked to the data and an acknowledgement; downloaded data must be deleted when the research ends or after the one-year access period.
Held in NIMH Data Archive collection 2936 under the NIMH Data Archive permission group. Access needs an approved NDA data access request.
What you can do
- Not stated
- Not stated
- Not stated
- Conditional
- Conditional
What you can share
- No
- Conditional
- Share trained models Not stated
What you must do
- Yes
- Share alike No
- Yes
- Conditional
- Manuscript review No
- No
- Yes
- Yes
Limits
- Yes
- Location limits No
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.
- NIMH Data Archive collection 2936 page (NIMH-IRP Data Science and Sharing Team), General, Experiments, Shared Data, Data Expected and Associated Studies tabs website
- NDA Study 547, NIMH NHGRI data-sharing project (doi:10.15154/1463004) website
- NDA Study 588, Whole-brain, time-locked activation with simple tasks (doi:10.15154/1464517) website
- NDA Study 589, Task dependence, tissue specificity and spatial distribution of widespread activations at 7T (doi:10.15154/1464520) website
- White et al. 2018, Automated quality assessment of structural magnetic resonance images in children, Hum Brain Mapp (PMC6866370) paper
- Gonzalez-Castillo et al. 2012, Whole-brain, time-locked activation with simple tasks revealed using massive averaging and model-free analysis, PNAS (PMC3325687) paper
- Gonzalez-Castillo et al. 2015, Task dependence, tissue specificity, and spatial distribution of widespread activations in large single-subject fMRI datasets at 7T, Cereb Cortex (PMC4635913) paper