MESA Cardiac MRI (Cardiac Atlas Project)
Multi-Ethnic Study of Atherosclerosis (MESA) baseline cardiac MRI, Cardiac Atlas Project share
2,450 baseline cine cardiac MRI studies (1.5 T, gradient echo) of asymptomatic adults from the US MESA cohort, with ~300 derived 3D left ventricular models, shared by the Cardiac Atlas Project after review by the MESA contributors.
Overview
The Multi-Ethnic Study of Atherosclerosis (MESA) is a US population study of men and women aged 45 to 84 from White, African-American, Hispanic and Chinese backgrounds, recruited at six centres without known cardiovascular disease. Part of the cardiac MRI from its baseline examination was contributed to the Cardiac Atlas Project (CAP), a consortium led from the University of Auckland that shares cardiac imaging for shape and function atlases. This entry covers that CAP share. The MESA brain MRI from Exam 6 is a separate collection held by the MESA Coordinating Center.
Composition
CAP hosts 2,450 MESA baseline cases. All participants were considered asymptomatic at recruitment. The 2011 CAP database paper reported 2,864 MESA volunteers contributed at that time; the CAP website now lists 2,450. CAP lists no breakdown by sex, age or ethnicity for the shared cases.
Acquisition
MESA scanned on Siemens and GE 1.5 T systems. Cine images were acquired with a gradient recalled echo (GRE) sequence in short-axis slices from base to apex and in three long-axis planes. CAP stores images as de-identified DICOM. The CAP page warns that GRE cine differs from the SSFP cine used in current protocols.
Annotations
The MESA MRI core laboratory at Johns Hopkins traced ventricular contours with MASS 4.0 and contributed them to CAP, but CAP states that it does not share these contours or the MESA clinical variables. CAP itself built about 300 3D left ventricular models from the images semi-automatically with the Cardiac Image Modeller (CIM) software.
Known limitations
- Access is per research project: CAP and the MESA contributors review a proposal before a data distribution agreement is signed. The MESA-specific agreement users sign is not published.
- When this entry was verified, the CAP MESA page said the dataset was temporarily unavailable while the data sharing agreement with the contributor was being renewed.
- The GRE cine images may not transfer to methods built for SSFP cine.
- No manual contours, demographics or clinical parameters are distributed with the images.
Cohort
Aggregate numbers from the sources below. Bars are relative to the largest value.
Country
studies
- United States 2,450 100%
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
A research proposal is reviewed and approved
Cardiac Atlas Project Policies and Procedures for Data Distribution to Users
Users submit a research project to the CAP Steering Committee and each contributing study, then sign a Data Distribution Agreement per study. Data may be used only for that project, not passed on without CAP approval, not used commercially without the contributors' permission, and are deleted when the project ends.
Users submit a research project to the CAP Steering Committee, the MESA contributors review it, and the user then signs a Data Distribution Agreement for MESA. That MESA-specific agreement is not published; the CAP user policy sets the terms every such agreement follows. As of the verification date the CAP MESA page states the dataset is temporarily unavailable while the data sharing agreement with the contributor is renewed.
What you can do
- Conditional
- Not stated
- Conditional
- Conditional
What you can share
- Conditional
- Conditional
- Share trained models Not stated
What you must do
- Yes
- Share alike No
- Yes
- No
- Conditional
- Release code No
- Yes
- Yes
Limits
- Yes
- No
Citation
Fonseca CG, Backhaus M, Bluemke DA, et al. The Cardiac Atlas Project: an imaging database for computational modeling and statistical atlases of the heart. Bioinformatics 27(16), 2288-2295 (2011). doi:10.1093/bioinformatics/btr360
All numbers
Every number on this page, as stored in stats.csv, with its source.
| Measure | Breakdown | Value | Source |
|---|---|---|---|
| Studies | total baseline examination cases hosted by CAP | 2,450 | cap-mesa-page |
| Studies | country=US six US centres | 2,450 | cap-mesa-page |
Sources
The keys used in the table above.
- cap-mesa-page Cardiac Atlas Project website, MESA dataset page website
- fonseca2011 Fonseca et al. 2011, Bioinformatics, The Cardiac Atlas Project paper