Sequential Inference VBM (ds000222)
Brain MRI of healthy younger and older adults with T1-weighted scans and behaviour on a probabilistic reversal task, plus Raven's matrices and n-back scores, from a voxel-based morphometry study of sequential inference. 79 subjects scanned at 3 T in Germany.
Overview
Sequential Inference VBM is the structural MRI release of a study by Thomas FitzGerald, Dorothea Hämmerer, Karl Friston, Shu-Chen Li and Raymond Dolan on whether people infer over sequences of past states when they learn under uncertainty. Younger and older adults did a probabilistic reversal task, and the strength of their sequential inference was related to grey matter density with voxel-based morphometry. The data went up on OpenfMRI in April 2017 as ds000222 and now sit on OpenNeuro, where snapshot 1.0.1 (December 2019) carries a CC0 license.
Composition
The release holds 79 healthy, right-handed adults: 43 younger adults in their twenties and early thirties and 36 older adults aged 60 to 73. Each subject has one T1-weighted image and a behavioural events file from the reversal task. The participants table lists age group, age, sex, height, weight, an abbreviated Raven's matrices score and 1-, 2- and 3-back accuracy. It counts 41 women and 38 men. Seven subjects lack Raven's scores, and some lack n-back scores.
Acquisition
All images were acquired on a Siemens 3 T Trio with an MPRAGE sequence at 1 mm isotropic resolution (TR 1550 ms, TE 2.34 ms, TI 900 ms, flip angle 9 degrees). The study was approved by the ethics committee of the Charité in Berlin. Subjects performed the task in four runs during fMRI, but the functional images are not part of this release.
Annotations
There are no image annotations. The events files give trial-level stimuli, responses and feedback, and the derivatives folder holds MRIQC quality metrics.
Known limitations
- Only T1-weighted images are shared; the task fMRI collected in the scanner is not.
- The anatomical images were defaced with pydeface by the OpenfMRI curators.
- The paper excluded five younger and two older adults for technical problems during acquisition, so the released set and the analysed set differ.
- Ages in the participants table do not match the paper's stated ranges exactly (21 to 34 against 20 to 33 for the younger group).
- The sample is small and highly educated.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 79 subjects.
Contrast / sequence
Groups can overlap
- T1-weighted 79 100%
From File tree of ds000222 (CC0), NIfTI files counted per subject folder
Age
mean 44.4, range 21 to 73
Condition
Groups can overlap
- Healthy control 79 100%
Methods, Participants in FitzGerald et al. 2017, Sequential inference as a mode of cognition and its correlates in fronto-parietal and hippocampal brain regions, PLoS Computational Biology
Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | Subjects with exactly this set |
|---|---|
79 |
From File tree of ds000222 (CC0), NIfTI files counted per subject folder
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
dataset_description.json of snapshot 1.0.1 states "License" CC0; CHANGES records the switch to CC0 in 1.0.1.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
FitzGerald THB, Hämmerer D, Friston KJ, Li S-C, Dolan RJ. Sequential inference as a mode of cognition and its correlates in fronto-parietal and hippocampal brain regions. PLoS Computational Biology 13(5):e1005418 (2017). doi:10.1371/journal.pcbi.1005418
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.
- FitzGerald et al. 2017, Sequential inference as a mode of cognition and its correlates in fronto-parietal and hippocampal brain regions, PLoS Computational Biology paper
- OpenNeuro ds000222 snapshot 1.0.1 (README, CHANGES, dataset_description.json, T1w.json and snapshot summary) website
- participants.tsv of ds000222 (CC0) computed
- File tree of ds000222 (CC0), NIfTI files counted per subject folder computed