SALD
Southwest University Adult Lifespan Dataset
T1-weighted MPRAGE and 8-minute resting-state fMRI from 494 healthy Chinese adults aged 19 to 80, scanned at 3 T at Southwest University, Chongqing. Shared openly through INDI in BIDS format with age, sex, handedness and QA measures.
Overview
The Southwest University Adult Lifespan Dataset (SALD) is a cross-sectional sample of healthy adults covering ages 19 to 80, collected by Jiang Qiu's group at the Brain Imaging Center of Southwest University in Chongqing, China, between 2010 and 2015. It was released through the International Neuroimaging Data-sharing Initiative (INDI) and described in a Scientific Data paper in 2018. Its purpose is to chart how brain structure and resting-state function change across adulthood in a non-Western sample and to give an independent set for replicating ageing findings.
Composition
The release holds 494 participants. Every participant has a T1-weighted anatomical image, and 493 of them also have an eight-minute resting-state fMRI run. Young adults were drawn from the university's student body, many middle-aged participants from its staff and the rest from nearby communities, so women in their twenties are overrepresented. A spreadsheet gives age, sex and Edinburgh handedness scores plus quality measures from the Preprocessed Connectomes Project QA protocol for each scan. Data are in BIDS on a public S3 bucket and as ten compressed archives of about 23.5 GB in total.
Acquisition
All scans come from one 3 T Siemens Trio. The sagittal MPRAGE has 176 slices of 1 mm isotropic voxels, TR 1900 ms, TE 2.52 ms and TI 900 ms. The resting-state run has 242 gradient-echo EPI volumes of 32 axial slices, TR 2000 ms, TE 30 ms and 3.4 x 3.4 mm in-plane voxels. Participants kept their eyes closed. Anatomical images were defaced with pydeface.
Annotations
There are no image labels. Phenotypes are limited to age, sex and handedness, with automated QA metrics.
Known limitations
- Single site and single scanner, so it offers no scanner variability.
- The age and sex distribution is uneven: few participants in their thirties and only one above 79.
- The paper gives 308 females and 187 males, one more than the 494 participants. The released spreadsheet lists 307 females.
- The paper reports a 90 degree flip angle for the MPRAGE, while the scanner protocol sheet on the release page shows 9 degrees.
- All scans were released regardless of quality. Users choose their own exclusion criteria from the QA metrics.
- Task fMRI was acquired for subgroups but is not part of the release.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 494 subjects.
Sex
- Female 307 62%
- Male 187 38%
Age
mean 45.2± 17.4 · range 19 to 80Age by sex
Reported cross table. Missing cells were not published (fewer than 10 subjects or not reported).
- 2670-7915
- 4360-6935
- 7250-5940
- 4840-4921
- 2230-3920
- 9220-2955
Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | bold | Subjects with exactly this set |
|---|---|---|
493 | ||
1 |
Contrast / sequence
subjects, values can overlap
- T1-weighted 494 100%
- BOLD fMRI 493 100%
Condition
subjects, values can overlap
- Healthy control 494 100%
Scanner vendor
subjects
- Siemens Healthineers 494 100%
Field strength
subjects
- 3 T 494 100%
Country
subjects
- China 494 100%
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
1000 Functional Connectomes Project / INDI terms (Creative Commons Attribution Non-Commercial, no version stated)
Non-commercial use only, after registering with the 1000 Functional Connectomes Project on NITRC. The NITRC project lists a Creative Commons Attribution Non-Commercial license without a version: derived works must credit the source and stay non-commercial but need not use the same license.
The release page states "Creative Commons License: Attribution - Non-Commercial" as its usage agreement. The images and the phenotype file download from the public fcp-indi S3 bucket without an account. The data descriptor asks users to cite it.
What you can do
- No
- Not stated
- Not stated
- Conditional
- Not stated
What you can share
- Not stated
- Conditional
- Share trained models Not stated
What you must do
- Yes
- No
- Conditional
- Ethics approval No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Commercial license: Not stated
Citation
Wei D, Zhuang K, Ai L, Chen Q, Yang W, Liu W, Wang K, Sun J, Qiu J. Structural and functional brain scans from the cross-sectional Southwest University adult lifespan dataset. Scientific Data 5, 180134 (2018). doi:10.1038/sdata.2018.134
All numbers
Every number on this page, as stored in stats.csv, with its source.
| Measure | Breakdown | Value | Source |
|---|---|---|---|
| Subjects | total | 494 | wei2018 Methods: Participants |
| Subjects | condition=healthy healthy adults; current psychiatric or neurological disorders were exclusion criteria | 494 | wei2018 Abstract |
| Subjects | country=CN all scanned at Southwest University in Chongqing | 494 | wei2018 Abstract |
| Subjects | field_strength=3 3.0 T Siemens Trio | 494 | wei2018 Methods: Image Acquisitions |
| Subjects | vendor=siemens | 494 | wei2018 Methods: Image Acquisitions |
| Subjects | contrast=T1w MPRAGE | 494 | sald-sub-information columns Sub_ID and T1Img |
| Subjects | contrast=bold 8-minute resting-state scan; one subject has no functional image | 493 | sald-sub-information columns Sub_ID and FunImg |
| Subjects | contrast_set=bold+T1w | 493 | sald-sub-information columns FunImg and T1Img |
| Subjects | contrast_set=T1w | 1 | sald-sub-information columns FunImg and T1Img |
| Subjects | sex=female the paper states 308 females and 187 males, which adds up to 495 | 307 | sald-sub-information column Sex |
| Subjects | sex=male | 187 | sald-sub-information column Sex |
| Subjects | age=10-19 | 4 | sald-sub-information column Age |
| Subjects | age=20-29 | 147 | sald-sub-information column Age |
| Subjects | age=30-39 | 42 | sald-sub-information column Age |
| Subjects | age=40-49 | 69 | sald-sub-information column Age |
| Subjects | age=50-59 | 112 | sald-sub-information column Age |
| Subjects | age=60-69 | 78 | sald-sub-information column Age |
| Subjects | age=70-79 | 41 | sald-sub-information column Age |
| Subjects | age=80-89 | 1 | sald-sub-information column Age |
| Subjects | sex=female;age=20-29 | 92 | sald-sub-information columns Sex and Age |
| Subjects | sex=female;age=30-39 | 22 | sald-sub-information columns Sex and Age |
| Subjects | sex=female;age=40-49 | 48 | sald-sub-information columns Sex and Age |
| Subjects | sex=female;age=50-59 | 72 | sald-sub-information columns Sex and Age |
| Subjects | sex=female;age=60-69 | 43 | sald-sub-information columns Sex and Age |
| Subjects | sex=female;age=70-79 | 26 | sald-sub-information columns Sex and Age |
| Subjects | sex=male;age=20-29 | 55 | sald-sub-information columns Sex and Age |
| Subjects | sex=male;age=30-39 | 20 | sald-sub-information columns Sex and Age |
| Subjects | sex=male;age=40-49 | 21 | sald-sub-information columns Sex and Age |
| Subjects | sex=male;age=50-59 | 40 | sald-sub-information columns Sex and Age |
| Subjects | sex=male;age=60-69 | 35 | sald-sub-information columns Sex and Age |
| Subjects | sex=male;age=70-79 | 15 | sald-sub-information columns Sex and Age |
| Minimum age | total | 19 | wei2018 Methods: Participants |
| Maximum age | total | 80 | wei2018 Methods: Participants |
| Mean age | total | 45.2 | sald-sub-information column Age |
| Median age | total | 48 | sald-sub-information column Age |
| Age SD | total | 17.4 | sald-sub-information column Age |
Sources
The keys used in the table above.
- wei2018 Wei et al. 2018, Structural and functional brain scans from the cross-sectional Southwest University adult lifespan dataset, Scientific Data paper
- indi-sald-page SALD release page, FCP/INDI Retrospective website
- sald-sub-information sub_information.xlsx phenotype file (CC BY-NC per the release page), sheet "demographic information" computed