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MRI Brain

PTBP

Pediatric Template of Brain Perfusion

Brain MRI of typically developing children, collected to chart how structure, white matter, connectivity and blood flow change from late childhood into adolescence. 120 children aged 7 to 18 from UCLA, 183 sessions, with a population template and IQ and socioeconomic data, under CC BY 4.0.

Overview

The Pediatric Template of Brain Perfusion (PTBP) is an openly shared multimodal MRI collection of typically developing children and adolescents, built to chart how brain structure, white matter, resting-state connectivity and cerebral blood flow change between late childhood and adolescence. It was collected by the Laboratory of Functional MRI Technology at UCLA and processed with ANTs and ANTsR by collaborators at the University of Pennsylvania and the University of Virginia.

Composition

120 children aged 7 to 18 at the first visit, 61 girls and 59 boys, contributed 183 imaging sessions. Most children were scanned once; the rest returned for up to four sessions. Each session can contain a T1-weighted MPRAGE, a pseudo-continuous ASL series with its mean CBF map, a diffusion scan and a resting-state BOLD run. Not every session has every modality, and the data index file records which images exist per session. Besides the subject images, the release contains a population T1 template with tissue priors and AAL labels, group-average CBF, BOLD and diffusion tensor images, a copy of the template in MNI space, and a spreadsheet with age, sex, handedness, WASI IQ scores, family income, parental education, Ladder SES scores and regional thickness, FA, CBF and connectivity summaries.

Acquisition

All scans come from one Siemens 3T TIM Trio with a 12-channel head coil at the Ahmanson-Lovelace Brain Mapping Center between January 2010 and February 2014. The protocol was a 1 mm isotropic MPRAGE, pCASL with 40 label/control pairs (labeling duration 1.5 s, post-labeling delay 1.2 s), single-shell DTI with 30 directions at b=1000 and one b=0 volume, and an eyes-open resting BOLD run of up to 244 volumes at 4 mm.

Known limitations

  • Single site and single scanner, so there is no scanner variability to learn from.
  • Recruitment excluded children with diagnosed developmental, neurological, psychiatric or learning disorders, so the cohort covers healthy development only.
  • Some sessions lack DTI, CBF or BOLD data, either because they were not acquired or because quality was insufficient. The authors used 91 subjects with complete, usable data in their own analyses.
  • The paper does not state whether faces were removed from the T1-weighted images.

Cohort

Aggregate numbers from the sources below. Bars are relative to the 120 subjects.

Contrast / sequence

Groups can overlap

  • Arterial spin labeling 120 100%
  • T1-weighted 119 99%
  • Diffusion-weighted 115 96%
  • BOLD fMRI 110 92%

Anatomy, PCASL, DWI, BOLD in ptbp_data_index.csv (CC BY 4.0), one row per session; contrasts from its Anatomy, PCASL, DWI and BOLD columns

Age

mean 12.4 ± 3.1, median 12.8, range 7 to 18

0
10
20
30
34
7-910-1213-1516-18

AgeAtScan in ptbp_summary_demographics.csv (CC BY 4.0), counted per subject at the first scan date; columns SubID, ScanDate, AgeAtScan, Sex; Figure 2 caption in Avants et al. 2015, The pediatric template of brain perfusion, Scientific Data

Age by sex

Reported cross table. Missing cells were not published (fewer than 10 or not reported).

Female Male
  • 13
    16-18
    10
  • 17
    13-15
    17
  • 13
    10-12
    18
  • 18
    7-9
    14

AgeAtScan, Sex in ptbp_summary_demographics.csv (CC BY 4.0), counted per subject at the first scan date; columns SubID, ScanDate, AgeAtScan, Sex

Contrast combinations

How many subjects have exactly each set of contrasts.

T1wdwiboldaslSubjects with exactly this set
108
7
3
1
1

Anatomy, PCASL, DWI, BOLD in ptbp_data_index.csv (CC BY 4.0), one row per session; contrasts from its Anatomy, PCASL, DWI and BOLD columns

License and access

Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer

Access
Open download

Download without an account

Access page

Creative Commons Attribution 4.0 International

Use, share and adapt the data for any purpose, including commercial use, as long as you credit the creators.

Both figshare records (the template and summary files, 10.6084/m9.figshare.923555, and the subject images, 10.6084/m9.figshare.1190933) state CC BY 4.0.

Original license text Version read: 4.0 Checked 2026-10-07

What you can do

  • Yes
  • Yes
  • Yes
  • Yes
  • Yes

What you can share

  • Yes
  • Yes
  • Yes

What you must do

  • Yes
  • Share alike No
  • No
  • No
  • Manuscript review No
  • Release code No
  • Return results No
  • Delete after use No

Limits

  • No
  • Location limits No

Citation

Avants BB, Duda JT, Kilroy E, Krasileva K, Jann K, Kandel BT, Tustison NJ, Yan L, Jog M, Smith R, Wang Y, Dapretto M, Wang DJJ. The pediatric template of brain perfusion. Scientific Data 2, 150003 (2015). doi:10.1038/sdata.2015.3

Sources

Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.