Placebo response in knee osteoarthritis pain (ds000208)
Brain connectivity predicts placebo response across chronic pain clinical trials
Pretreatment T1w MRI and resting-state fMRI of 56 knee osteoarthritis pain patients from two placebo and duloxetine trials plus 20 healthy controls, scanned at Northwestern University, with treatment arm and analgesic response, in BIDS under CC0.
Overview
This OpenNeuro dataset holds the baseline brain scans of a Northwestern University project on placebo response in chronic knee osteoarthritis pain. Tétreault and colleagues scanned patients before two clinical trials started and used resting-state connectivity to predict who would later report pain relief on placebo. Study 1 was a two-week single-blind trial in which every patient took placebo pills. Study 2 was a three-month double-blind trial that randomised patients to placebo or duloxetine. The data are shared under a CC0 waiver; the paper's data availability statement names accession ds000208.
Composition
There are 76 participants: 56 patients with knee osteoarthritis pain and 20 healthy controls matched to the patients on mean age and sex mix. Of the patients, 17 come from study 1 and 39 from study 2. The participant table lists 40 women and 36 men aged 44 to 78. For patients it adds the study, the treatment arm, a responder flag and the percentage pain relief on the visual analogue scale and on the WOMAC osteoarthritis index. A responder had at least 20% less knee pain at the end of treatment. Each participant has one T1-weighted scan and one resting-state fMRI run, all taken before treatment.
Acquisition
All scans come from a 3 T Siemens Trio. The T1-weighted MPRAGE has 1 mm isotropic voxels and 160 slices (TR 2500 ms, TE 3.36 ms). The resting-state run is gradient-echo EPI with 40 slices of 3 mm, a 64 x 64 matrix, TR 2.5 s, TE 30 ms and 300 volumes, covering the brain from cerebellum to vertex.
Known limitations
The cohort is small, and the paper names sample size as a weakness. Only pretreatment scans are shared; there are no follow-up images. Study 3, an untreated observational group described in the paper, is not part of this release. Of 143 people recruited across the three studies, 45 did not finish or had scans that failed quality control and are not included.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 76 subjects.
Sex
- Female 40 53%
- Male 36 47%
Age
· range 44 to 78Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | bold | Subjects with exactly this set |
|---|---|---|
76 |
Contrast / sequence
subjects, values can overlap
- T1-weighted 76 100%
- BOLD fMRI 76 100%
Condition
subjects, values can overlap
- Knee osteoarthritis 56 74%
- Healthy control 20 26%
Scanner vendor
subjects
- Siemens Healthineers 76 100%
Field strength
subjects
- 3 T 76 100%
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
dataset_description.json of snapshot 1.0.1 states "License" CC0.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Tétreault P, Mansour A, Vachon-Presseau E, Schnitzer TJ, Apkarian AV, Baliki MN. Brain connectivity predicts placebo response across chronic pain clinical trials. PLoS Biology 14(10): e1002570 (2016). doi:10.1371/journal.pbio.1002570
All numbers
Every number on this page, as stored in stats.csv, with its source.
| Measure | Breakdown | Value | Source |
|---|---|---|---|
| Subjects | total 76 rows and 76 subject folders in snapshot 1.0.1; the paper reports 17 study 1 and 39 study 2 patients plus 20 controls (Methods: Participants) | 76 | ds000208-participants participant_id |
| Subjects | condition=knee_osteoarthritis type patient; 17 from study 1 (2-week placebo) and 39 from study 2 (3-month placebo or duloxetine) | 56 | ds000208-participants type |
| Subjects | condition=healthy type control | 20 | ds000208-participants type |
| Subjects | sex=female | 40 | ds000208-participants gender |
| Subjects | sex=male | 36 | ds000208-participants gender |
| Subjects | age=40-49 | 9 | ds000208-participants Age |
| Subjects | age=50-59 | 41 | ds000208-participants Age |
| Subjects | age=60-69 | 21 | ds000208-participants Age |
| Subjects | age=70-79 | 5 | ds000208-participants Age |
| Subjects | condition=knee_osteoarthritis;sex=female | 30 | ds000208-participants type; gender |
| Subjects | condition=knee_osteoarthritis;sex=male | 26 | ds000208-participants type; gender |
| Subjects | condition=healthy;sex=female | 10 | ds000208-participants type; gender |
| Subjects | condition=healthy;sex=male | 10 | ds000208-participants type; gender |
| Subjects | condition=knee_osteoarthritis;age=50-59 Cells below 10 left out | 28 | ds000208-participants type; Age |
| Subjects | condition=knee_osteoarthritis;age=60-69 Cells below 10 left out | 17 | ds000208-participants type; Age |
| Subjects | condition=healthy;age=50-59 Cells below 10 left out | 13 | ds000208-participants type; Age |
| Minimum age | total | 44 | ds000208-participants Age |
| Maximum age | total | 78 | ds000208-participants Age |
| Scans | total 76 T1w and 76 bold files | 152 | ds000208-file-tree *.nii.gz |
| Scans | contrast=T1w One per subject | 76 | ds000208-file-tree anat/*_T1w.nii.gz |
| Scans | contrast=bold One resting-state run per subject | 76 | ds000208-file-tree func/*_task-rest_bold.nii.gz |
| Subjects | contrast=T1w | 76 | ds000208-file-tree anat/*_T1w.nii.gz |
| Subjects | contrast=bold | 76 | ds000208-file-tree func/*_task-rest_bold.nii.gz |
| Subjects | contrast_set=bold+T1w Every subject has one T1w and one resting-state bold file | 76 | ds000208-file-tree sub-*/ |
| Subjects | field_strength=3 3T Siemens Trio for all study 1 and 2 participants | 76 | tetreault2016 Methods, Brain Scanning Parameters (Studies 1 and 2) |
| Subjects | vendor=siemens 3T Siemens Trio | 76 | tetreault2016 Methods, Brain Scanning Parameters (Studies 1 and 2) |
Sources
The keys used in the table above.
- tetreault2016 Tétreault et al. 2016, Brain connectivity predicts placebo response across chronic pain clinical trials, PLoS Biology paper
- openneuro-ds000208-v101 OpenNeuro ds000208 snapshot 1.0.1 (dataset_description.json, README, CHANGES and snapshot summary) website
- ds000208-participants participants.tsv of ds000208 snapshot 1.0.1 (CC0), counted per row computed
- ds000208-file-tree File tree of ds000208 snapshot 1.0.1 (CC0), NIfTI files counted per subject and BIDS suffix computed