Navigation Training fMRI (ds004639)
nav_training
Task and resting-state fMRI with T1-weighted, T2-weighted and diffusion MRI from a navigation training project, with most participants scanned in two sessions at one of two US sites during encoding and retrieval tasks.
Overview
This OpenNeuro collection (ds004639), titled nav_training, holds brain MRI from a navigation training project led by Arne Ekstrom and Steven Weisberg. Participants were scanned at the University of Arizona and the University of Florida, most of them in two sessions, while doing an encoding task, a retrieval task and a resting-state scan. Snapshot 1.0.0 was published in September 2025 under CC0. The dataset README is a placeholder that promises more details later, and no study paper is linked, so the design, the training procedure and the participants are not described in any public source yet.
Composition
Counted from the file tree, the snapshot has 84 subjects and 158 sessions: 74 subjects have two sessions and 10 have one. Every subject has T1-weighted, T2-weighted and BOLD images, and 83 also have diffusion scans. There are 1,416 BOLD runs (630 encoding, 630 retrieval and 156 resting-state), 158 T1-weighted, 159 T2-weighted and 155 diffusion volumes, plus field maps. Subject IDs starting with 1 come from the Arizona site (41 subjects) and those starting with 2 from the Florida site (43 subjects). participants.tsv lists a single ID and carries no age, sex or group information.
Acquisition
All scans come from 3 T Siemens systems: a Skyra at the University of Arizona and a Prisma at the University of Florida, according to the JSON sidecars. A typical session has a T1-weighted image with 1 mm slices, a T2-weighted image, a diffusion series acquired with anterior-posterior phase encoding, four encoding runs, four retrieval runs and one resting-state run. Field maps are phase-difference with magnitude images at the Arizona site and spin-echo EPI at the Florida site.
Annotations
There are no image labels. The file tree holds no events files and no derivatives folder, so trial timing for the task runs is not shared.
Known limitations
- No demographics, inclusion criteria or task descriptions are published with the data.
- The README and participants.tsv are incomplete placeholders.
- Ten subjects have only one session, and a few sessions lack diffusion.
- Two scanner models at two sites were used, one per site.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 84 subjects.
Contrast / sequence
Groups can overlap
- T1-weighted 84 100%
- T2-weighted 84 100%
- BOLD fMRI 84 100%
- Diffusion-weighted 83 99%
anat folders, func folders, dwi folders in File tree and T1w JSON sidecars of ds004639 snapshot 1.0.0 (CC0), NIfTI files counted per subject and session folder, sidecar fields Manufacturer, ManufacturersModelName, MagneticFieldStrength and InstitutionName
Contrast / sequence by field strength
ScansReported cross table. A dot marks a cell the source does not give.
| 3 T | |
|---|---|
| T1-weighted | 158 |
T1w sidecars: MagneticFieldStrength in File tree and T1w JSON sidecars of ds004639 snapshot 1.0.0 (CC0), NIfTI files counted per subject and session folder, sidecar fields Manufacturer, ManufacturersModelName, MagneticFieldStrength and InstitutionName
Country
- United States 84 100%
T1w sidecars: InstitutionName in File tree and T1w JSON sidecars of ds004639 snapshot 1.0.0 (CC0), NIfTI files counted per subject and session folder, sidecar fields Manufacturer, ManufacturersModelName, MagneticFieldStrength and InstitutionName
Contrast / sequence by scanner vendor
ScansReported cross table. A dot marks a cell the source does not give.
| Siemens Healthineers | |
|---|---|
| T1-weighted | 158 |
T1w sidecars: Manufacturer in File tree and T1w JSON sidecars of ds004639 snapshot 1.0.0 (CC0), NIfTI files counted per subject and session folder, sidecar fields Manufacturer, ManufacturersModelName, MagneticFieldStrength and InstitutionName
Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | T2w | dwi | bold | Subjects with exactly this set |
|---|---|---|---|---|
83 |
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
dataset_description.json of snapshot 1.0.0 states "License" CC0.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Ekstrom A, Weisberg S. nav_training. OpenNeuro, version 1.0.0 (2025). doi:10.18112/openneuro.ds004639.v1.0.0
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.
- OpenNeuro ds004639 snapshot 1.0.0 (dataset_description.json, README, CHANGES and snapshot summary) website
- File tree and T1w JSON sidecars of ds004639 snapshot 1.0.0 (CC0), NIfTI files counted per subject and session folder, sidecar fields Manufacturer, ManufacturersModelName, MagneticFieldStrength and InstitutionName computed