BrainLat
The BrainLat project, a multimodal neuroimaging dataset of neurodegeneration from underrepresented backgrounds
Brain MRI, resting-state EEG and cognitive tests from Latin American patients with Alzheimer's disease, frontotemporal dementia, Parkinson's disease or multiple sclerosis and healthy controls, shared to develop affordable biomarkers for underrepresented populations. 780 people from five countries.
Overview
BrainLat is a multimodal collection of brain imaging, resting-state EEG, cognitive scores and demographics from people with neurodegenerative diseases and healthy controls in Latin America. It was assembled by the Latin American Brain Health Institute with clinical sites of the ReDLat consortium, which harmonised recruitment and neuropsychological assessment across centres. The aim is to give researchers data from populations that are rare in other dementia cohorts and to support low-cost, scalable biomarkers. The data are hosted on Synapse and described by Prado et al. in Scientific Data (2023).
Composition
The paper reports 780 participants: 278 with Alzheimer's disease, 163 with behavioural variant frontotemporal dementia, 57 with Parkinson's disease, 32 with multiple sclerosis and 250 healthy controls. 453 are women. Mean age is 62.7 years (range 21 to 89); the multiple sclerosis group is much younger than the others. Participants came from eight sites in Argentina, Chile, Colombia, Mexico and Peru. Some Alzheimer's patients from one Colombian site carry PSEN1 mutations. Not every participant has every modality: according to the per-group table, about 710 have anatomical T1-weighted MRI, about 440 resting-state fMRI and about 360 diffusion MRI, and a smaller group has only EEG. Cognitive (MoCA, IFS and others) and disease-specific clinical scales are supplied as CSV files.
Acquisition
MRI was acquired on 1.5 T and 3 T scanners from GE, Siemens and Philips within six months of the clinical visit. The protocol includes a T1-weighted MPRAGE, multi-echo resting-state BOLD with eyes open and diffusion imaging; the paper also mentions T2-FLAIR but gives no counts for it. EEG was recorded for ten minutes, eyes closed, on a 128-channel Biosemi system at every site and lightly preprocessed. Images were defaced with PyDeface and organised in BIDS, with MRIQC quality metrics in the derivatives.
Annotations
No image annotations. Labels are the clinical diagnosis, sex, age, education, handedness, cognitive test scores and disease severity scales.
Known limitations
- Imaging was not harmonised across sites and scanners.
- Several tables in the paper are internally inconsistent: the control rows of the imaging table add up to more than the 250 controls, and some per-site sex ratios do not match their counts.
- Disease duration, genetics and socioeconomic data are not included.
- MRI download needs a Synapse account and a short request form; EEG is in an open folder of the same project.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 780 subjects.
Sex
- Female 453 58%
- Male 327 42%
Contrast / sequence
Groups can overlap
- T1-weighted 712 91%
- BOLD fMRI 441 57%
- Diffusion-weighted 363 47%
Field strength
- 3 T 451 58%
- 1.5 T 265 34%
Country
- Chile 291 37%
- Argentina 204 26%
- Colombia 175 22%
- Peru 81 10%
- Mexico 29 4%
Condition by field strength
Reported cross table. A dot marks a cell the source does not give.
| 3 T | 1.5 T | |
|---|---|---|
| Healthy control | 177 | 81 |
| Alzheimer's disease | 91 | 156 |
| Frontotemporal dementia | 97 | 28 |
| Parkinson's disease | 55 | · |
| Multiple sclerosis | 31 | · |
Age
mean 62.7 ± 9.5, range 21 to 89
No age bins reported.
Abstract; Table 2, Abstract in Prado et al. 2023, The BrainLat project, a multimodal neuroimaging dataset of neurodegeneration from underrepresented backgrounds, Scientific Data
Condition
Groups can overlap
- Alzheimer's disease 278 36%Age mean 72.2 ± 7.9
- Healthy control 250 32%Age mean 67.9 ± 8.9
- Frontotemporal dementia 163 21%Age mean 65.1 ± 10.5
- Parkinson's disease 57 7%Age mean 69.9 ± 11.2
- Multiple sclerosis 32 4%Age mean 38.5 ± 8.9
Condition by sex
Reported cross table. A dot marks a cell the source does not give.
| Female | Male | |
|---|---|---|
| Alzheimer's disease | 167 | 111 |
| Healthy control | 164 | 86 |
| Frontotemporal dementia | 77 | 86 |
| Parkinson's disease | 19 | 38 |
| Multiple sclerosis | 26 | 6 |
Condition by contrast / sequence
Reported cross table. A dot marks a cell the source does not give.
| T1-weighted | BOLD fMRI | Diffusion-weighted | |
|---|---|---|---|
| Healthy control | · | 198 | 188 |
| Alzheimer's disease | 245 | 86 | 54 |
| Frontotemporal dementia | 124 | 97 | 91 |
| Parkinson's disease | 55 | 30 | 30 |
| Multiple sclerosis | 31 | 30 | · |
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Create an account and accept terms online
The Synapse project page says the EEG data can be taken directly from its data folder. For the MRI data, users with a Synapse account fill in a short Google form (name, institution, e-mail and Synapse username) or e-mail the named contact at Universidad de San Andrés.
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
The Synapse project wiki states that the BrainLat Dataset, © 2023 by Pavel Prado, Vicente Medel and Agustín Ibañez, is licensed under CC0.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Prado P, Medel V, Gonzalez-Gomez R, Sainz-Ballesteros A, Vidal V, Santamaría-García H, Moguilner S, Mejia J, Slachevsky A, Behrens MI, Aguillon D, Lopera F, Parra MA, Matallana D, Maito MA, Garcia AM, Custodio N, Funes AA, Piña-Escudero S, Birba A, Fittipaldi S, Legaz A, Ibañez A. The BrainLat project, a multimodal neuroimaging dataset of neurodegeneration from underrepresented backgrounds. Scientific Data 10, 889 (2023). doi:10.1038/s41597-023-02806-8
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.