BEAN Go/No-Go fMRI
Psychosocial adversity and inhibitory control: an fMRI study of children growing up in extreme poverty
Brain MRI and Go/No-Go task fMRI of young children from a low-income neighbourhood of Dhaka, Bangladesh, collected to study how psychosocial adversity relates to the neural basis of inhibitory control. Includes adversity and maternal mental health scores.
Overview
This OpenNeuro release (ds005504) holds the task fMRI data behind a study of inhibitory control in young children growing up in extreme poverty in Dhaka, Bangladesh. The children come from the Bangladesh Early Adversity Neuroimaging (BEAN) project, a collaboration of Boston Children's Hospital, Harvard and the icddr,b. The study asked whether brain activity during a Go/No-Go task varies with the child's exposure to psychosocial adversity and with maternal stress and depression. The data are shared under a CC0 waiver. The README asks users to tell the study lead their research question, and states that doing so does not affect access.
Composition
The release contains 68 children aged 5 to 7 years (34 boys, 34 girls), a subset of the 260 BEAN participants who had usable fMRI and questionnaire data and passed the motion and task accuracy criteria. They were drawn from two earlier cohort studies in the Mirpur area of Dhaka (PROVIDE and CRYPTO). Each child has one T1-weighted scan and three runs of the Go/No-Go task, with separate event files for correct and incorrect Go and No-Go trials. The participants table gives sex, age in months, Go and No-Go accuracy, subscale and total scores of a childhood psychosocial adversity scale, and maternal mental health scores (EPDS, PSS and TS).
Acquisition
All scans were acquired on one 3T Siemens MAGNETOM Verio with a 12-channel head coil at the National Institute for Neuroscience and Hospital in Dhaka. The T1-weighted image is a 1 mm isotropic MPRAGE. The functional runs are gradient-echo EPI with a repetition time of 2 s and 3 x 3 x 4.8 mm voxels. In the task the children pressed a button for a rooster and withheld the press for a chick, over 80 trials per run with 25% No-Go trials.
Known limitations
- Single site and scanner, and a small sample from one low-income urban area.
- Only children who met motion and accuracy thresholds are included, so the release is not a random sample of the cohort.
- The coding of the Sex column is not documented; the sex split above comes from the paper.
- No derivatives, fieldmaps or resting-state data are part of the release.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 68 subjects.
Sex
- Female 34 50%
- Male 34 50%
Methods: Participants in Surani et al. 2024, Examining the relationship between psychosocial adversity and inhibitory control (bioRxiv preprint 2024.02.05.578942)
Contrast / sequence
Groups can overlap
- T1-weighted 68 100%
- BOLD fMRI 68 100%
From BIDS file tree of ds005504 (CC0), raw NIfTI files under sub-*/ counted per suffix
Scanner vendor
- Siemens Healthineers 68 100%
Methods: MRI Data Acquisition in Surani et al. 2024, Examining the relationship between psychosocial adversity and inhibitory control (bioRxiv preprint 2024.02.05.578942)
Country
- Bangladesh 68 100%
Methods: Participants in Surani et al. 2024, Examining the relationship between psychosocial adversity and inhibitory control (bioRxiv preprint 2024.02.05.578942)
Age
mean 6.6, median 6.9, range 5.1 to 7
Age in participants.tsv of ds005504 (CC0), counted per row; Age column in months converted to years
Condition
Groups can overlap
- Healthy control 68 100%
Methods: Participants in Surani et al. 2024, Examining the relationship between psychosocial adversity and inhibitory control (bioRxiv preprint 2024.02.05.578942)
Field strength
- 3 T 68 100%
Methods: MRI Data Acquisition in Surani et al. 2024, Examining the relationship between psychosocial adversity and inhibitory control (bioRxiv preprint 2024.02.05.578942)
Contrast combinations
How many subjects have exactly each set of contrasts.
| T1w | bold | Subjects with exactly this set |
|---|---|---|
68 |
From BIDS file tree of ds005504 (CC0), raw NIfTI files under sub-*/ counted per suffix
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Creative Commons Zero 1.0 Universal
Public domain dedication. Do anything with the data, including commercial use, without asking and without having to give credit.
dataset_description.json of snapshot 1.1.0 states "License" CC0. The README asks users to tell Charles Nelson their research question and states that this has no bearing on access.
What you can do
- Yes
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- No
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Surani Z, Turesky TK, Sullivan E, Shama T, Haque R, Islam N, Kakon SH, Yu X, Petri WA, Nelson CA, Gaab N. Examining the relationship between psychosocial adversity and inhibitory control: A functional magnetic resonance imaging study of children growing up in extreme poverty. Journal of Experimental Child Psychology (2024). doi:10.1016/j.jecp.2024.106072
Sources
Every number on this page comes from one of these documents. Each chart names the table or page it is taken from. The raw numbers are in stats.csv.
- Surani et al. 2024, Examining the relationship between psychosocial adversity and inhibitory control (bioRxiv preprint 2024.02.05.578942) paper
- OpenNeuro ds005504 snapshot 1.1.0 (dataset_description.json, README, CHANGES and snapshot size) website
- participants.tsv of ds005504 (CC0), counted per row; Age column in months converted to years computed
- BIDS file tree of ds005504 (CC0), raw NIfTI files under sub-*/ counted per suffix computed