ACRIN 6698/I-SPY2 Breast DWI
ACRIN 6698/I-SPY2 Breast DWI (ACRIN 6698 trial, NCT01564368)
Serial breast MRI of 385 women with invasive breast cancer from the multicenter ACRIN 6698 trial, a diffusion substudy of I-SPY 2, at up to four time points of neoadjuvant chemotherapy, with 4 b-value DWI, ADC maps, manual tumor segmentations, DCE, test-retest scans and pCR outcome.
Overview
ACRIN 6698/I-SPY2 Breast DWI is the imaging collection of the ACRIN 6698 trial (NCT01564368), which ran as a substudy inside the I-SPY 2 neoadjuvant breast cancer trial. It tested whether the change in tumor apparent diffusion coefficient (ADC) during neoadjuvant chemotherapy predicts pathologic complete response (pCR). Women were enrolled at ten US institutions between August 2012 and January 2015. The University of California, San Francisco processed the images, and The Cancer Imaging Archive released the collection in 2021 under CC BY 4.0. It serves work on treatment response prediction, breast DWI analysis and ADC repeatability.
Composition
The collection holds 385 of the 388 eligible patients, all women aged 23 to 77 (median 49), with 1,123 MRI studies. Every patient has a pre-treatment study (T0); later studies were made only for the 272 patients randomized into I-SPY 2 treatment arms: early treatment after 3 weeks of paclitaxel (T1), mid-treatment between paclitaxel and anthracycline (T2) and post-treatment before surgery (T3). Download subsets cover the 242-patient primary analysis cohort, 71 patients with analyzable same-session test-retest DWI, and the 117 training and 74 test patients of the BMMR2 challenge. A spreadsheet adds age, race, tumor type, HR/HER2 subtype, grade, tumor size, pCR and per-study DWI quality ratings.
Acquisition
Scans were done prone on 1.5 T or 3 T scanners with a dedicated bilateral breast coil, the same scanner configuration for every study of a patient. The protocol required axial T2-weighted imaging, fat-suppressed single-shot echo-planar DWI with b = 0, 100, 600 and 800 s/mm² and T1-weighted DCE. GE, Siemens and Philips scanners appear in the metadata.
Annotations
For DWI studies that passed quality control, the collection includes trace images, ADC maps and manually drawn multi-slice whole-tumor segmentations from the trial analysis, as DICOM SEG and as MR objects. DCE studies come with ipsilateral cropped images, percent enhancement and signal enhancement ratio maps, and the functional tumor volume analysis mask.
Known limitations
- Only primary-analysis and test-retest studies are guaranteed to have segmentations and DWI derived objects.
- Some derived objects are not strictly DICOM compliant, and DCE functional tumor volumes stored here differ slightly from those used in I-SPY 2.
- Clinical data are limited because I-SPY 2 was ongoing at release.
- The 116 non-randomized patients have only a baseline study.
Cohort
Aggregate numbers from the sources below. Bars are relative to the 385 subjects.
Sex
- Female 385 100%
Age
mean 48.8± 11 · range 23 to 77No age bins reported.
Modality
subjects
- MRI 385 100%
Scanner vendor
subjects
- GE HealthCare 278 72%
- Siemens Healthineers 59 15%
- Philips 48 12%
Country
subjects
- United States 385 100%
Split
subjects
- Training 117 30%
- Test 74 19%
License and access
Our reading of the license, not legal advice. Before you use the data, read the original license and confirm that your use is allowed. We take no responsibility for how you use a dataset. Full disclaimer
Download without an account
Images and segmentations download through the TCIA Data Retriever without an account. Separate download options cover the 242-patient primary analysis cohort, the 71-patient test-retest set and the BMMR2 challenge training and test sets.
Creative Commons Attribution 4.0 International
Use, share and adapt the data for any purpose, including commercial use, as long as you credit the creators.
What you can do
- Yes
- Yes
- Yes
- Yes
What you can share
- Yes
- Yes
- Yes
What you must do
- Yes
- Share alike No
- No
- No
- Manuscript review No
- Release code No
- Return results No
- Delete after use No
Limits
- No
- Location limits No
Citation
Newitt DC, Partridge SC, Zhang Z, Gibbs J, Chenevert T, Rosen M, Bolan P, Marques H, Romanoff J, Cimino L, Joe BN, Umphrey H, Ojeda-Fournier H, Dogan B, Oh KY, Abe H, Drukteinis J, Esserman LJ, Hylton NM. (2021). ACRIN 6698/I-SPY2 Breast DWI [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/tcia.kk02-6d95
All numbers
Every number on this page, as stored in stats.csv, with its source.
| Measure | Breakdown | Value | Source |
|---|---|---|---|
| Subjects | total 385 of 388 eligible patients; 3 had no analyzable MRI study | 385 | tcia-acrin-6698 Data Access table |
| Studies | total | 1,123 | tcia-acrin-6698 Data Access table |
| Scans | total DICOM series, MR and SEG | 18,747 | tcia-acrin-6698 Data Access table |
| Images | total DICOM images (slices) | 2,911,334 | tcia-acrin-6698 Data Access table |
| Subjects | sex=female the collection page summary lists 386 female against N = 385 | 385 | tcia-acrin-6698-digest Patient ID, Patient Sex columns |
| Mean age | total | 48.8 | tcia-acrin-6698 Demographic Summary of Available Imaging |
| Age SD | total | 11 | tcia-acrin-6698 Demographic Summary of Available Imaging |
| Median age | total interquartile range 41 to 56 | 49 | tcia-acrin-6698 Demographic Summary of Available Imaging |
| Minimum age | total | 23 | tcia-acrin-6698 Demographic Summary of Available Imaging |
| Maximum age | total | 77 | tcia-acrin-6698 Demographic Summary of Available Imaging |
| Subjects | modality=MR | 385 | tcia-acrin-6698-digest Patient ID, Modality columns |
| Subjects | vendor=ge Signa HDxt, DISCOVERY MR750w, Optima MR450w | 278 | tcia-acrin-6698-digest Patient ID, Manufacturer columns |
| Subjects | vendor=siemens Avanto, TrioTim, Prisma_fit | 59 | tcia-acrin-6698-digest Patient ID, Manufacturer columns |
| Subjects | vendor=philips Achieva, Ingenia; 2 subjects have series from two vendors | 48 | tcia-acrin-6698-digest Patient ID, Manufacturer columns |
| Subjects | split=train BMMR2 challenge training set | 117 | tcia-acrin-6698 Data Access table |
| Subjects | split=test BMMR2 challenge test set | 74 | tcia-acrin-6698 Data Access table |
| Subjects | country=US enrolled at 10 US institutions | 385 | newitt2019 Results |
Sources
The keys used in the table above.
- tcia-acrin-6698 TCIA ACRIN 6698/I-SPY2 Breast DWI collection page (version 1, updated 2021/12/17) website
- tcia-acrin-6698-digest TCIA ACRIN 6698 radiology metadata digest (ACRIN-6698-I-SPY2-Breast-DWI-manifes-nbia-digest-1.xlsx, CC BY 4.0, open download), counted per unique Patient ID computed
- partridge2018 Partridge et al. 2018, Radiology (PMC6283325) paper
- newitt2019 Newitt et al. 2019, Journal of Magnetic Resonance Imaging (PMC6524146) paper